Package index • weda

Database connection

Functions used to connect to the database

weda_connect(): Database Connection

Camera Trap Processing

Functions used to process, check and upload camera trap data

standardise_species_names(): This function standardises species names in a dataframe

vba_name_conversions: Name conversions between scientific and common names

camera_trap_dq(): Camera Trap Data Quality Checks

prepare_camtrap_upload(): Prepare camera trap data for upload to the database

upload_camtrap_data(): Upload camera trap data to database

camtrap_operation_from_records(): Operation from records

camtrap_operation_mapview(): View the camera trap

check_unique_project(): check whether project is unique or already on database

convert_to_latlong(): Convert zone 54/55 easting/northings into lat/longs

mcrecordTable(): Camera Trap Record Table for subset sites and using multiple cores

proofsafe_to_operation(): Proofsafe to operation

Database views

Functions used to create views on the database

transect_records_curated_view() transect_curated_view() transect_project_curated_view() records_curated_view() operation_curated_view() project_curated_view(): Curated views

processed_SubStation_presence_absence() processed_transect_presence_absence(): Presence/Absence Views

vba_format(): VBA Upload format for camera trap data

Database information

Functions used get information on the database

data_dictionary: Data Dictionary

Shiny App Modules

Functions used in the shiny app

projectMapUI() projectMapServer(): Shiny Map UI for Projects

dataUploadpUI() dataUploadServer(): Data Upload Shiny Module

camtrap_app() transect_app(): Run the camera trap app

proofsafeDownloadUI() proofsafeDownloadServer(): proofsafe formatter module

Obtaining Data

Functions used get data from the database

DBdetectionHistory(): Database to detion histories

Transect Upload Tools

filter_records_outside_transect_area(): Filter records outside transect area

koala_proofsafe_format() gg_proofsafe_format() region_gg_proofsafe_format(): Format proofsafe data for database

prepare_transect_upload(): Prepare transect data for upload to the database

transectMapUI() transectMapServer(): Shiny Map UI for Projects

transect_dq(): Transect Data Quality Checks

transectdataUploadpUI() transectdataUploadServer(): Data Upload Shiny Module

upload_transect_data(): Upload camera trap data to database

visualise_records(): Visualise transects, records and sight-lines